Basic Information
Locus ID:
Ceq02G2265
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 24685727 | 24687149 | - | Ceq02G2265 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 41,094.56 Da | 30.80 | 94.82 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 201 | 318 | 5.7E-11 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 38 | 115 | 9.9E-6 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 185 | 319 | 8.11E-16 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 33 | 176 | 1.7E-17 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 192 | 319 | 2.5E-8 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 26 | 175 | 5.8E-10 | IPR036378 |
| SMART | SM00554 | fasc_3 | 226 | 319 | 1.1E-10 | IPR000782 |
| SMART | SM00554 | fasc_3 | 63 | 178 | 1.4 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 188 | 316 | 11.139742 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 27 | 175 | 12.172649 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 355 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_030961820.1 | fasciclin-like arabinogalactan protein 2 [Quercus lobata] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6RAX1 | Fasciclin-like arabinogalactan protein 2 OS=Carpinus fangiana OX=176857 GN=FH972_014224 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology