Basic Information
Locus ID:
Ceq02G2098
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 20684268 | 20690382 | + | Ceq02G2098 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 56,766.31 Da | 42.34 | 84.55 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13637 | Ankyrin repeats (many copies) | 170 | 198 | 4.2E-5 | - |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 49 | 132 | 1.0E-17 | IPR020683 |
| Pfam | PF00023 | Ankyrin repeat | 221 | 259 | 0.009 | IPR002110 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 14 | 287 | 3.73E-42 | IPR036770 |
| SUPERFAMILY | SSF57850 | RING/U-box | 328 | 388 | 2.76E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 316 | 390 | 4.0E-6 | IPR013083 |
| Gene3D | G3DSA:1.25.40.20 | - | 7 | 138 | 4.4E-30 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 145 | 282 | 5.5E-17 | IPR036770 |
| SMART | SM00248 | ANK_2a | 220 | 252 | 0.67 | IPR002110 |
| SMART | SM00248 | ANK_2a | 177 | 206 | 3.4E-4 | IPR002110 |
| SMART | SM00248 | ANK_2a | 111 | 142 | 2.7 | IPR002110 |
| SMART | SM00248 | ANK_2a | 44 | 73 | 2.8E-5 | IPR002110 |
| SMART | SM00248 | ANK_2a | 77 | 106 | 0.067 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 177 | 204 | 10.232388 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 177 | 204 | 10.25881 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 111 | 132 | 8.629499 | IPR002110 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 332 | 382 | 9.686208 | IPR001841 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 44 | 76 | 14.58583 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 111 | 132 | 8.613973 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 44 | 75 | 13.469215 | - |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 347 | 356 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 498 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07270.1 | XB3 ortholog 3 in Arabidopsis thaliana. | 0 |
| RefSeq | XP_041002816.1 | E3 ubiquitin-protein ligase XBAT33-like [Juglans microcarpa x Juglans regia] | 0 |
| Q4FE45 | E3 ubiquitin-protein ligase XBAT33 OS=Arabidopsis thaliana OX=3702 GN=XBAT33 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2N9HWF2 | RING-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43945 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology