Basic Information
Locus ID:
Ceq02G1899
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
CRM domain-containing protein At3g25440
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 18140407 | 18155973 | + | Ceq02G1899 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.14 | 161,466.92 Da | 48.80 | 70.87 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 32 | 286 | 3.80172E-101 | - |
| Pfam | PF02365 | No apical meristem (NAM) protein | 396 | 537 | 7.2E-21 | IPR003441 |
| Pfam | PF01985 | CRS1 / YhbY (CRM) domain | 916 | 999 | 2.6E-14 | IPR001890 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 29 | 286 | 1.0E-56 | IPR001245 |
| SUPERFAMILY | SSF75471 | YhbY-like | 915 | 1008 | 8.37E-19 | IPR035920 |
| SUPERFAMILY | SSF101941 | NAC domain | 380 | 556 | 5.62E-35 | IPR036093 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 18 | 313 | 2.02E-74 | IPR011009 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 404 | 561 | 1.5E-28 | IPR036093 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 14 | 105 | 3.9E-21 | - |
| Gene3D | G3DSA:3.30.110.60 | - | 915 | 1010 | 3.8E-15 | IPR035920 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 107 | 297 | 3.2E-51 | - |
| SMART | SM00220 | serkin_6 | 26 | 290 | 4.7E-65 | IPR000719 |
| SMART | SM01103 | CRS1_YhbY_2 | 915 | 999 | 1.8E-15 | IPR001890 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 395 | 556 | 29.931097 | IPR003441 |
| ProSiteProfiles | PS51295 | CRM domain profile. | 913 | 1010 | 17.700903 | IPR001890 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 26 | 290 | 42.816845 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 146 | 158 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 32 | 53 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 839 | 862 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1380 | 1430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1079 | 1098 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1190 | 1255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1079 | 1108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1153 | 1181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 842 | 861 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1338 | 1368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1297 | 1327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1153 | 1430 | - | - |
| Coils | Coil | Coil | 1023 | 1043 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_035550799.1 | CRM-domain containing factor CFM9, mitochondrial [Juglans regia] | 0 |
| Q9LT57 | CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1R3GMR3 | Protein kinase domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_24925 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology