Basic Information
Locus ID:
Ceq02G1087
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 9935321 | 9943536 | + | Ceq02G1087 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 80,445.53 Da | 43.35 | 87.54 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 450 | 719 | 8.19465E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 446 | 716 | 1.3E-41 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 143 | 201 | 5.5E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 69 | 2.2E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 232 | 3.23E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 426 | 716 | 1.64E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 523 | 738 | 2.8E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 412 | 521 | 2.4E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 247 | 8.6E-47 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 444 | 719 | 36.244537 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 450 | 482 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 164 | 177 | 2.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 97 | 110 | 2.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_015901360.1 | protein STRUBBELIG-RECEPTOR FAMILY 6 [Ziziphus jujuba var. spinosa] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QKE7 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003450 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology