Basic Information
Locus ID:
Ceq02G1009
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 9024466 | 9033692 | - | Ceq02G1009 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 30,060.85 Da | 57.00 | 88.04 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 73 | 121 | 1.13496E-18 | - |
| Pfam | PF12906 | RING-variant domain | 73 | 111 | 1.5E-10 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 67 | 124 | 5.55E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 66 | 125 | 3.5E-17 | IPR013083 |
| SMART | SM00744 | ringv_2 | 72 | 121 | 8.3E-15 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 65 | 127 | 19.807516 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 36 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50440.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_018838269.1 | E3 ubiquitin-protein ligase MARCHF3 isoform X1 [Juglans regia] | 0 |
| TrEMBL | A0A2I4G332 | E3 ubiquitin-protein ligase MARCHF3 isoform X1 OS=Juglans regia OX=51240 GN=LOC109004242 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology