Basic Information
Locus ID:
Ceq02G0606
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 5548254 | 5553649 | - | Ceq02G0606 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 70,277.61 Da | 41.89 | 93.78 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 25 | 129 | 2.4E-7 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 211 | 477 | 1.6E-94 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 128 | 4.19E-19 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 11 | 133 | 5.6E-13 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 127 | 0.0017 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 211 | 501 | 93.588974 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 97 | 11.791785 | IPR000210 |
| Coils | Coil | Coil | 547 | 574 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_050250109.1 | BTB/POZ domain-containing protein At5g03250-like [Quercus robur] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6QCS2 | NPH3 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_001653 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology