Basic Information
Locus ID:
Ceq02G0403
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Sister chromatid cohesion protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 3573332 | 3585605 | + | Ceq02G0403 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 91,081.81 Da | 46.19 | 73.08 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 40 | 249 | 1.34E-6 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 648 | 690 | 1.65E-5 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 645 | 695 | 2.6E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 642 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 722 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 829 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 618 | 636 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 603 | 617 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 803 | 820 | - | - |
| Coils | Coil | Coil | 26 | 46 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_042968275.1 | uncharacterized protein LOC122301177 isoform X2 [Carya illinoinensis] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A5N6QD91 | Tudor domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_001885 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology