Basic Information
Locus ID:
Ceq01G2298
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 30885188 | 30887901 | + | Ceq01G2298 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.70 | 64,010.27 Da | 55.79 | 63.76 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03107 | C1 domain | 331 | 375 | 3.2E-7 | IPR004146 |
| Pfam | PF03107 | C1 domain | 135 | 181 | 2.5E-7 | IPR004146 |
| Pfam | PF03107 | C1 domain | 245 | 294 | 1.1E-6 | IPR004146 |
| Pfam | PF03107 | C1 domain | 492 | 539 | 2.3E-6 | IPR004146 |
| Pfam | PF03107 | C1 domain | 386 | 429 | 7.5E-7 | IPR004146 |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 356 | 442 | 3.84E-18 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 106 | 193 | 6.59E-10 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 210 | 296 | 3.66E-11 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 11 | 56 | 4.19E-6 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 464 | 541 | 2.51E-16 | - |
| SMART | SM00249 | PHD_3 | 453 | 515 | 4.2 | IPR001965 |
| SMART | SM00249 | PHD_3 | 347 | 406 | 0.45 | IPR001965 |
| SMART | SM00249 | PHD_3 | 206 | 269 | 3.9 | IPR001965 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G01350.1 | Cysteine/Histidine-rich C1 domain family protein. | 0 |
| RefSeq | XP_042943504.1 | uncharacterized protein LOC122277554 isoform X1 [Carya illinoinensis] | 0 |
| TrEMBL | A0A8T1PFL2 | Phorbol-ester/DAG-type domain-containing protein OS=Carya illinoinensis OX=32201 GN=CIPAW_09G029900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg35663, jg8188, jg8412, jg8450, jg8451, jg8457 |
| Apiaceae | Apium graveolens | 5 | Ag10G00884, Ag1G00153, Ag1G00315, Ag8G00374, Ag8G01874 |
| Asteraceae | Flaveria trinervia | 12 | Ftri10G04197, Ftri15G15158, Ftri15G19898, Ftri1G06516 ... |
| Brassicaceae | Arabidopsis thaliana | 35 | AT1G58037.1, AT2G04680.1, AT2G19650.1, AT2G19660.1 ... |
| Brassicaceae | Eutrema salsugineum | 34 | Thhalv10001923m.g.v1.0, Thhalv10002199m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 5 | Sp2g06340.v2.2, Sp5g15690.v2.2, Sp7g01400.v2.2 ... |
| Brassicaceae | Brassica nigra | 39 | BniB01g002950.2N, BniB01g004980.2N, BniB01g026110.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 17 | Ceq01G2298, Ceq02G1953, Ceq03G0083, Ceq03G0113, Ceq03G0190 ... |
| Casuarinaceae | Casuarina glauca | 23 | Cgl01G2601, Cgl01G2602, Cgl01G2604, Cgl03G0217, Cgl03G0218 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 6 | nbisL1-mrna-3679, nbisL1-mrna-5622, nbisL1-mrna-8116 ... |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G17998 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-17876 |
| Salicaceae | Populus euphratica | 4 | populus_peu26078, populus_peu26197, populus_peu26198 ... |