Basic Information
Locus ID:
Ceq01G1891
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
RNA polymerase II C-terminal domain phosphatase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 26652318 | 26660678 | - | Ceq01G1891 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 75,943.05 Da | 47.28 | 88.86 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03031 | NLI interacting factor-like phosphatase | 245 | 382 | 2.3E-8 | IPR004274 |
| SUPERFAMILY | SSF56784 | HAD-like | 130 | 405 | 1.03E-15 | IPR036412 |
| Gene3D | G3DSA:3.40.50.1000 | - | 127 | 433 | 1.0E-25 | IPR023214 |
| SMART | SM00577 | forpap2 | 236 | 389 | 1.0E-7 | IPR004274 |
| ProSiteProfiles | PS50969 | FCP1 homology domain profile. | 133 | 402 | 14.824446 | IPR004274 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 635 | 658 | - | - |
| Coils | Coil | Coil | 571 | 605 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01270.1 | carboxyl-terminal domain (ctd) phosphatase-like 2. Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses. | 0 |
| RefSeq | XP_018825888.1 | RNA polymerase II C-terminal domain phosphatase-like 2 isoform X2 [Juglans regia] | 0 |
| Q5YDB5 | RNA polymerase II C-terminal domain phosphatase-like 2 OS=Arabidopsis thaliana OX=3702 GN=CPL2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A5N6RJK5 | protein-serine/threonine phosphatase OS=Carpinus fangiana OX=176857 GN=FH972_017220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology