Basic Information
Locus ID:
Ceq01G1401
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 21805857 | 21812614 | + | Ceq01G1401 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 82,001.14 Da | 38.02 | 91.50 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 41 | 340 | 1.03869E-172 | - |
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 358 | 657 | 2.89534E-157 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 76 | 335 | 2.0E-8 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 364 | 653 | 9.3E-27 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 39 | 341 | 1.54E-44 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 357 | 657 | 1.41E-38 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 40 | 340 | 3.9E-39 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 356 | 658 | 6.7E-42 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 357 | 658 | 40.801132 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 41 | 341 | 41.312698 | IPR030395 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 707 | 730 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 709 | 726 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26690.1 | PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_018812474.1 | glycerophosphodiester phosphodiesterase GDPDL3-like [Juglans regia] | 0 |
| Q9SZ11 | Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana OX=3702 GN=GDPDL3 PE=2 SV=3 | 0 | |
| TrEMBL | A0A2I4DZ93 | glycerophosphodiester phosphodiesterase OS=Juglans regia OX=51240 GN=LOC108984850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology