Basic Information
Locus ID:
Ceq01G1400
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 21785335 | 21798677 | + | Ceq01G1400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 158,382.20 Da | 36.86 | 90.00 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 1041 | 1341 | 5.17141E-150 | - |
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 320 | 620 | 1.17547E-146 | - |
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 725 | 1024 | 1.76477E-159 | - |
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 26 | 303 | 1.08974E-144 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 760 | 1019 | 1.5E-6 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 1048 | 1337 | 9.2E-29 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 327 | 616 | 8.8E-27 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 35 | 299 | 9.42E-32 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 320 | 620 | 5.76E-40 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 1040 | 1341 | 2.54E-39 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 724 | 1020 | 4.45E-41 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 34 | 302 | 6.6E-30 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 318 | 621 | 1.9E-42 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 723 | 1022 | 7.2E-39 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 1039 | 1341 | 1.2E-41 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 320 | 621 | 35.255104 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 1 | 304 | 28.759024 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 725 | 1025 | 39.891682 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 1041 | 1342 | 34.840977 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26690.1 | PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_018812474.1 | glycerophosphodiester phosphodiesterase GDPDL3-like [Juglans regia] | 0 |
| Q9SZ11 | Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana OX=3702 GN=GDPDL3 PE=2 SV=3 | 0 | |
| TrEMBL | A0A5C7IEQ3 | glycerophosphodiester phosphodiesterase OS=Acer yangbiense OX=1000413 GN=EZV62_008717 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology