Basic Information
Locus ID:
Ceq01G1346
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 21251429 | 21253945 | - | Ceq01G1346 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 11,099.27 Da | 52.34 | 70.71 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16116 | Ubl_Smt3_like | 18 | 91 | 1.35782E-47 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 20 | 90 | 2.1E-24 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 6 | 95 | 9.88E-28 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 2 | 95 | 3.3E-40 | - |
| SMART | SM00213 | ubq_7 | 20 | 91 | 1.7E-14 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 18 | 95 | 15.993241 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26840.1 | small ubiquitin-like modifier 1. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. | 0 |
| RefSeq | XP_018812104.1 | small ubiquitin-related modifier 1 [Juglans regia] | 0 |
| P55852 | Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A1VQH5 | Small ubiquitin-related modifier OS=Morella rubra OX=262757 GN=CJ030_MR4G001405 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology