Basic Information
Locus ID:
Ceq01G0728
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 11634818 | 11641609 | + | Ceq01G0728 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 41,817.75 Da | 41.98 | 81.24 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 305 | 353 | 1.2E-11 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 43 | 254 | 2.93E-22 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 298 | 361 | 2.1E-16 | IPR036028 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 284 | 367 | 2.8E-16 | - |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 42 | 259 | 1.1E-7 | IPR027267 |
| SMART | SM00326 | SH3_2 | 301 | 356 | 7.4E-15 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 298 | 357 | 21.951395 | IPR001452 |
| Coils | Coil | Coil | 148 | 177 | - | - |
| Coils | Coil | Coil | 189 | 209 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31440.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_023915437.1 | SH3 domain-containing protein 1-like [Quercus suber] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J4VQE6 | SH3 domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_009965 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology