Basic Information
Locus ID:
Ceq01G0341
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 5383730 | 5386551 | - | Ceq01G0341 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 79,257.47 Da | 49.85 | 75.97 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 473 | 549 | 4.35939E-48 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 480 | 525 | 6.3E-10 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 66 | 248 | 2.9E-55 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 479 | 548 | 1.16E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 468 | 555 | 2.0E-17 | IPR036638 |
| SMART | SM00353 | finulus | 482 | 531 | 4.0E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 476 | 525 | 16.843782 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 549 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 486 | - | - |
| Coils | Coil | Coil | 522 | 549 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_040985930.1 | transcription factor MYC2-like [Juglans microcarpa x Juglans regia] | 0 |
| A0A3Q7HRZ6 | Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QJR6 | BHLH domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003007 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology