Basic Information
Locus ID:
Ceq01G0127
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 2134628 | 2135050 | + | Ceq01G0127 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.57 | 14,947.20 Da | 39.24 | 121.86 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 41 | 61 | 1.4 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 111 | 133 | 1.5 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 67 | 81 | 1.7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 139 | 2.83E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 5 | 140 | 1.2E-31 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg41083 |
| Apiaceae | Apium graveolens | 1 | Ag7G02197 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.2182.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G30055 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0059, Ceq01G0127 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00013970 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr06G007550 |
| Poaceae | Zea mays | 2 | Zm00001eb046230_P001, Zm00001eb227890_P001 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-24014 |