Basic Information
Locus ID:
CQ.Regalona.r1.9BG0014650
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 32720587 | 32738400 | - | CQ.Regalona.r1.9BG0014650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 90,481.65 Da | 45.16 | 85.54 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 153 | 209 | 2.0E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 547 | 706 | 1.5E-26 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 77 | 5.9E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 244 | 1.26E-35 | - |
| SUPERFAMILY | SSF101447 | Formin homology 2 domain (FH2 domain) | 486 | 493 | 7.59E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 520 | 706 | 2.6E-45 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 512 | 621 | 5.6E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 622 | 729 | 3.9E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 261 | 1.1E-42 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 544 | 839 | 23.410864 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 330 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_021715733.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X1 [Chenopodium quinoa] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N1L5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology