Basic Information
Locus ID:
CQ.Regalona.r1.9BG0011980
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 15815623 | 15820778 | - | CQ.Regalona.r1.9BG0011980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 59,027.46 Da | 32.42 | 78.55 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 29 | 459 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 294 | 459 | 3.0E-21 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 40 | 180 | 2.5E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 34 | 467 | 4.2E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 16 | 122 | 3.6E-39 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 123 | 460 | 1.9E-78 | - |
| SMART | SM00220 | serkin_6 | 40 | 459 | 1.5E-54 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 459 | 30.265854 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 69 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 167 | 179 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 254 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021767394.1 | SRSF protein kinase 2-like [Chenopodium quinoa] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MLG1 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology