Basic Information
Locus ID:
CQ.Regalona.r1.9BG0011000
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 12845488 | 12848673 | - | CQ.Regalona.r1.9BG0011000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 62,813.05 Da | 44.37 | 96.93 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 31 | 67 | 2.1E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 27 | 78 | 1.31E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 153 | 350 | 9.02E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 94 | 425 | 5.3E-14 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 13 | 70 | 1.5E-6 | - |
| SMART | SM00256 | fbox_2 | 34 | 73 | 4.9E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 28 | 75 | 9.709425 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02910.2 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021749865.1 | F-box/FBD/LRR-repeat protein At1g51370-like [Chenopodium quinoa] | 0 |
| Q9LYZ4 | F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana OX=3702 GN=At5g02910 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M617 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology