Basic Information
Locus ID:
CQ.Regalona.r1.9BG0010980
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 12787727 | 12796907 | - | CQ.Regalona.r1.9BG0010980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 62,492.49 Da | 47.34 | 105.15 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 13 | 52 | 2.4E-4 | IPR001810 |
| SUPERFAMILY | SSF52058 | L domain-like | 142 | 374 | 2.82E-12 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 11 | 71 | 7.46E-10 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 255 | 526 | 4.3E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 11 | 242 | 1.5E-10 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04230.1 | FBD, F-box and Leucine Rich Repeat domains containing protein. | 0 |
| RefSeq | XP_021749768.1 | F-box/FBD/LRR-repeat protein At1g78750-like [Chenopodium quinoa] | 0 |
| Q6NKX3 | F-box/FBD/LRR-repeat protein At2g04230 OS=Arabidopsis thaliana OX=3702 GN=At2g04230 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M606 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology