Basic Information
Locus ID:
CQ.Regalona.r1.9BG0008120
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 8471450 | 8474290 | + | CQ.Regalona.r1.9BG0008120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 70,090.36 Da | 32.02 | 96.24 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 41 | 77 | 9.7E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 128 | 189 | 3.6E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 353 | 615 | 1.6E-23 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 620 | 7.58E-46 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 240 | 3.74E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 201 | 241 | 5.1E-6 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 421 | 626 | 8.1E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 198 | 7.3E-38 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 312 | 420 | 1.8E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 345 | 604 | 23.863152 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 323 | - | - |
| Coils | Coil | Coil | 613 | 627 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021761815.1 | pollen receptor-like kinase 4 [Chenopodium quinoa] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M9X4 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology