Basic Information
Locus ID:
CQ.Regalona.r1.9BG0005080
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 5104684 | 5114082 | - | CQ.Regalona.r1.9BG0005080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.23 | 59,533.73 Da | 43.49 | 75.60 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 2 | 209 | 1.3E-76 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 251 | 476 | 1.5E-59 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 267 | 442 | 6.1E-218 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 7 | 479 | 6.1E-218 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 530 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 530 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_021716397.1 | proteinaceous RNase P 2-like [Chenopodium quinoa] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LD46 | ribonuclease P OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology