Basic Information
Locus ID:
CQ.Regalona.r1.9BG0004460
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
WNK4
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 4576082 | 4579322 | - | CQ.Regalona.r1.9BG0004460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 42,584.59 Da | 52.87 | 82.15 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 76 | 6.7E-6 | IPR001245 |
| Pfam | PF12202 | Oxidative-stress-responsive kinase 1 C-terminal domain | 157 | 198 | 5.3E-5 | IPR024678 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 99 | 2.41E-16 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 94 | 9.6E-18 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 145 | 208 | 2.4E-7 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 89 | 13.135447 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 382 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58350.1 | with no lysine (K) kinase 4. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. | 0 |
| RefSeq | XP_021716773.1 | probable serine/threonine-protein kinase WNK5 [Chenopodium quinoa] | 0 |
| Q9LVL5 | Probable serine/threonine-protein kinase WNK4 OS=Arabidopsis thaliana OX=3702 GN=WNK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LCZ1 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg33668 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000035438 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.9BG0004460 |