Basic Information
Locus ID:
CQ.Regalona.r1.9BG0004110
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 4282159 | 4286546 | + | CQ.Regalona.r1.9BG0004110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 64,768.12 Da | 52.19 | 81.49 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 338 | 572 | 1.7E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 315 | 573 | 1.59E-50 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 316 | 577 | 4.0E-53 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 323 | 574 | 26.421406 | IPR000719 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 544 | 566 | 2.5E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 500 | 522 | 2.5E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 394 | 407 | 2.5E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 430 | 448 | 2.5E-10 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 52 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58520.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021716294.1 | mitogen-activated protein kinase kinase kinase-like [Chenopodium quinoa] | 0 |
| Q8RWL6 | Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MW85 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg16675 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_7070 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah028163 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g175330 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg26850, Sbi_jg33721 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg8410 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00003049 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl73123, Sgl76670 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000039129, gene:ENSEOMG00000039784 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7AG0001580, CQ.Regalona.r1.9BG0004110 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30060980, pistato.v30063830 |
| Apiaceae | Apium graveolens | 1 | Ag6G02081 |
| Arecaceae | Cocos nucifera | 1 | COCNU_04G013510 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103710336 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.588.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri3G29504 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT5G07140.1, AT5G58520.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10013017m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp6g20210.v2.2, Sp6g35760.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g053740.2N, BniB08g013120.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1833 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G1891 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g18290 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g02840 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-6542, nbisL1-mrna-9927 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG09.1048 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00016309, Pov_00016339 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.3968, BH01.4364, CH01.4597 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0244500, gene-QOZ80_3BG0283530 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0384360.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_068687, gene-QYE76_068733 |
| Poaceae | Oryza coarctata | 2 | Oco05G010820, Oco06G011060 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g18430.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G387200 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0102438, Pt_Chr0102470 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr01G032190, Chr04G008870, Chr07G002800, Chr12G007430 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G342900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG015430, gene_TRIDC4BG033500 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G111900.1, TraesCS4B02G192000.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb013650_P002, Zm00001eb396880_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-3601 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g3825 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG16.1654, evm.TU.LG26.13 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g37630 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-24704, nbisL1-mrna-30054 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-15690 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16327 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00015407 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-4476 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-20827 |
| Salicaceae | Populus euphratica | 2 | populus_peu01722, populus_peu36092 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132606391 |
| Solanaceae | Solanum chilense | 1 | SOLCI002069900 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107021737 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_3685 |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G2342 |