Basic Information
Locus ID:
CQ.Regalona.r1.9AG0024320
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 58577219 | 58586178 | - | CQ.Regalona.r1.9AG0024320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 65,705.87 Da | 49.49 | 82.63 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 449 | 491 | 2.21E-6 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 47 | 252 | 6.81E-7 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 443 | 497 | 7.7E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 590 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 590 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_021776134.1 | uncharacterized protein LOC110739961 isoform X1 [Chenopodium quinoa] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A803MBZ9 | Tudor domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology