Basic Information
Locus ID:
CQ.Regalona.r1.9AG0021410
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 55831341 | 55835884 | - | CQ.Regalona.r1.9AG0021410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.80 | 133,914.38 Da | 44.37 | 78.87 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 575 | 820 | 2.94725E-135 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 961 | 1224 | 1.6E-121 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 603 | 770 | 1.8E-29 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 596 | 737 | 2.9E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 571 | 820 | 1.5E-57 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 480 | 1224 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 600 | 829 | 32.86451 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 870 | 893 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 471 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 388 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 237 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_021753112.1 | translocase of chloroplast 120, chloroplastic-like [Chenopodium quinoa] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LGH0 | AIG1-type G domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology