Basic Information
Locus ID:
CQ.Regalona.r1.9AG0020890
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 55400029 | 55404526 | + | CQ.Regalona.r1.9AG0020890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 103,027.92 Da | 35.58 | 88.89 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 603 | 876 | 2.44841E-97 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 197 | 218 | 0.33 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 339 | 373 | 0.0071 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 395 | 435 | 2.2E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 70 | 4.3E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 598 | 871 | 2.2E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 116 | 155 | 1.5E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 446 | 3.23E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 585 | 886 | 5.32E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 675 | 890 | 1.9E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 334 | 7.0E-83 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 559 | 674 | 2.0E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 337 | 460 | 6.4E-36 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 119 | 142 | 2.0E-4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 58.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 597 | 877 | 7.9E-43 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 398 | 422 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 267 | 291 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 143 | 167 | 330.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 597 | 877 | 40.329262 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 121 | 142 | 7.180607 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 722 | 734 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 603 | 635 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 483 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 483 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021753165.1 | receptor protein kinase TMK1-like [Chenopodium quinoa] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LGL7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology