Basic Information
Locus ID:
CQ.Regalona.r1.9AG0018030
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Ubiquitin fusion degradation protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 52626235 | 52633377 | - | CQ.Regalona.r1.9AG0018030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 35,269.58 Da | 65.40 | 66.01 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 13 | 184 | 7.4E-80 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 7 | 107 | 4.5E-44 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 109 | 182 | 5.6E-34 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 277 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 318 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_021753480.1 | ubiquitin recognition factor in ER-associated degradation protein 1-like [Chenopodium quinoa] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LPG0 | Ubiquitin fusion degradation protein 1 homolog OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology