HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: CQ.Regalona.r1.9AG0015110
Species & Taxonomic ID: Chenopodium quinoa & 63459
Genome Assembly: GCA_040571445.1
Description: f-box protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr9A 49503807 49505027 - CQ.Regalona.r1.9AG0015110
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.84 46,408.14 Da 42.05 86.33 -0.29
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 6 87 2.75E-8 IPR036047
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 118 328 1.3E-15 IPR017451
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G14315.2 F-box and associated interaction domains-containing protein. 0
RefSeq XP_021732149.1 F-box/kelch-repeat protein At3g23880-like [Chenopodium quinoa] 0
TrEMBL A0A803LE83 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 14 Ah010513, Ah010514, Ah010515, Ah010517, Ah010518, Ah010519 ...
Ah010521, Ah010523, Ah010524, Ah010525, Ah010526, Ah010529, Ah010530, Ah010533
Amaranthaceae Salicornia bigelovii 1 Sbi_jg11619
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000014872, gene:ENSEOMG00000039400 ...
gene:ENSEOMG00000052018
Amaranthaceae Chenopodium quinoa 12 CQ.Regalona.r1.7BG0009460, CQ.Regalona.r1.7BG0009480 ...
CQ.Regalona.r1.7BG0009490, CQ.Regalona.r1.7BG0009500, CQ.Regalona.r1.7BG0009510, CQ.Regalona.r1.7BG0009520, CQ.Regalona.r1.9AG0015070, CQ.Regalona.r1.9AG0015080, CQ.Regalona.r1.9AG0015090, CQ.Regalona.r1.9AG0015100, CQ.Regalona.r1.9AG0015110, CQ.Regalona.r1.9AG0015120
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.