Basic Information
Locus ID:
CQ.Regalona.r1.9AG0013370
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 46986845 | 46987861 | + | CQ.Regalona.r1.9AG0013370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 38,511.38 Da | 44.23 | 79.08 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 54 | 281 | 4.0E-38 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 27 | 281 | 3.81E-47 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 104 | 2.7E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 107 | 288 | 6.4E-41 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 282 | 29.318876 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 148 | 160 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 321 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41990.1 | with no lysine (K) kinase 8. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Interacts specifically with and phosphorylates AtVHA-C, subunit C of the vacuolar H+-ATPase. | 0 |
| RefSeq | XP_021732056.1 | probable serine/threonine-protein kinase WNK6 [Chenopodium quinoa] | 0 |
| Q2RA93 | Probable serine/threonine-protein kinase WNK6 OS=Oryza sativa subsp. japonica OX=39947 GN=WNK6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LEP9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.5BG0020240, CQ.Regalona.r1.7BG0011280 ... |