Basic Information
Locus ID:
CQ.Regalona.r1.9AG0011870
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 44089600 | 44091281 | + | CQ.Regalona.r1.9AG0011870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 19,317.04 Da | 42.59 | 90.70 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 10 | 72 | 1.1E-5 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 73 | 9.24E-12 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 77 | 154 | 6.4E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 76 | 1.0E-16 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29180.3 | - | 0 |
| RefSeq | XP_021765438.1 | putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 [Chenopodium quinoa] | 0 |
| C0LGR6 | Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana OX=3702 GN=At4g29180 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803MM00 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.9AG0011870 |
| Apiaceae | Apium graveolens | 1 | Ag7G01769 |
| Arecaceae | Cocos nucifera | 1 | scaffold036689G000030 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G02955 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g38550.v2.2 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g13040 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_057048 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr18G014370 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC1BG062190, gene_TRIDC3AG042260 ... |
| Poaceae | Triticum aestivum | 2 | TraesCS1D02G346800.1.cds1, TraesCS6D02G120500.1.cds1 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-13858, nbis-gene-13860, nbis-gene-13863 ... |
| Zosteraceae | Zostera marina | 1 | Zosma05g12140.v3.1 |