Basic Information
Locus ID:
CQ.Regalona.r1.9AG0010090
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 40122953 | 40133876 | + | CQ.Regalona.r1.9AG0010090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.09 | 87,942.90 Da | 44.11 | 80.34 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 422 | 462 | 6.05238E-17 | - |
| Pfam | PF16135 | Tify domain binding domain | 357 | 404 | 7.6E-14 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 170 | 223 | 3.7E-16 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 423 | 463 | 1.0E-8 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 404 | 463 | 1.23E-17 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 661 | 757 | 2.9E-9 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 519 | 565 | 1.46E-6 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 414 | 479 | 1.5E-17 | IPR013083 |
| Gene3D | G3DSA:3.40.630.30 | - | 621 | 780 | 1.2E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 486 | 580 | 6.3E-11 | IPR013083 |
| SMART | SM00249 | PHD_3 | 422 | 463 | 5.5E-12 | IPR001965 |
| SMART | SM00249 | PHD_3 | 511 | 568 | 0.92 | IPR001965 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 629 | 778 | 10.33709 | IPR000182 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 420 | 465 | 10.602499 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 423 | 462 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 119 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_021732895.1 | uncharacterized protein LOC110699677 [Chenopodium quinoa] | 0 |
| O43918 | Autoimmune regulator OS=Homo sapiens OX=9606 GN=AIRE PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M6E4 | PHD-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology