Basic Information
Locus ID:
CQ.Regalona.r1.9AG0003620
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 5634296 | 5638610 | + | CQ.Regalona.r1.9AG0003620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 8,653.88 Da | 63.02 | 78.29 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 7 | 53 | 8.6E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 65 | 4.45E-14 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 3 | 74 | 9.2E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 76 | 10.0401 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58760.1 | Integrin-linked protein kinase family. | 0 |
| RefSeq | XP_021724430.1 | serine/threonine-protein kinase HT1-like isoform X2 [Chenopodium quinoa] | 0 |
| Q93Z30 | Serine/threonine-protein kinase 12 OS=Arabidopsis thaliana OX=3702 GN=BHP PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MGN1 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.9AG0003620 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G2923 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-26472 |