Basic Information
Locus ID:
CQ.Regalona.r1.8BG0022460
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 75668102 | 75669949 | - | CQ.Regalona.r1.8BG0022460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 71,853.88 Da | 43.65 | 64.68 | -0.94 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 518 | 558 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 518 | 556 | - | - |
| Coils | Coil | Coil | 503 | 523 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14900.1 | 0 | |
| RefSeq | XP_021723620.1 | uncharacterized protein LOC110690999 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A0K9QQ72 | DUF287 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_153780 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg21186 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17570 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah014569 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g196770 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg25000, Sbi_jg8853 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg19749 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00007784 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl42238, Sgl47015 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000032811, gene:ENSEOMG00000045417 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0019900, CQ.Regalona.r1.8BG0022460 |
| Apiaceae | Apium graveolens | 1 | Ag11G03186 |
| Arecaceae | Cocos nucifera | 2 | scaffold007826G000040, scaffold007826G000050 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103699087 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.1061.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri14G13520 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G14900.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10022322m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g13110.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB01g050130.2N |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno15g04450 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g09080 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.1446 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00019042, Pov_00019044, Pov_00019045 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.1445, BH09.1626, CH09.1790 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0311950, gene-QOZ80_4BG0343280 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0178590.1.CDS1 |
| Poaceae | Oryza coarctata | 2 | Oco07G009710, Oco08G009510 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g42030.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G148600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0302238, Pt_Chr0302275 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr23G009630, Chr25G010070, Chr26G010120 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G617700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG051630, gene_TRIDC2BG054490 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G356000.1, TraesCS2B02G372100.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb078480_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-5172 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21549 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.1781, evm.TU.LG14.97 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g06390 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_7_RagTag.1660 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-19877 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-6410 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-13585 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000002l.27 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-22080 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-12353 |
| Salicaceae | Populus euphratica | 1 | populus_peu00602 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132618151 |
| Solanaceae | Solanum chilense | 1 | SOLCI004077200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107026394 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.29375_chr10_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G0093 |
| Zosteraceae | Zostera marina | 1 | Zosma02g18900.v3.1 |