Basic Information
Locus ID:
CQ.Regalona.r1.8BG0020440
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 73311066 | 73314922 | - | CQ.Regalona.r1.8BG0020440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.29 | 66,627.34 Da | 43.02 | 103.13 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 222 | 246 | 0.09 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 249 | 271 | 1.1 | IPR001611 |
| Pfam | PF00646 | F-box domain | 58 | 96 | 5.7E-5 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 197 | 220 | 0.024 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 285 | 626 | 2.08E-28 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 158 | 395 | 1.82E-37 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 48 | 93 | 8.37E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 50 | 287 | 5.4E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 431 | 627 | 8.7E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 430 | 4.2E-20 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 594 | 619 | 430.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 223 | 248 | 5.8E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 329 | 354 | 0.0079 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 489 | 514 | 0.033 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 249 | 274 | 1.4E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 355 | 380 | 61.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 462 | 487 | 0.028 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 436 | 461 | 19.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 516 | 541 | 37.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 301 | 326 | 540.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 381 | 406 | 280.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 568 | 593 | 4.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 171 | 196 | 0.019 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 197 | 222 | 1.2E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 542 | 566 | 10.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_021760795.1 | EIN3-binding F-box protein 1-like [Chenopodium quinoa] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LHA0 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology