Basic Information
Locus ID:
CQ.Regalona.r1.8BG0020060
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Ubiquitin system component Cue protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 72874895 | 72883460 | - | CQ.Regalona.r1.8BG0020060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 29,290.51 Da | 50.53 | 79.35 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14279 | CUE | 42 | 76 | 9.90512E-7 | - |
| Pfam | PF02845 | CUE domain | 43 | 76 | 1.2E-5 | IPR003892 |
| SUPERFAMILY | SSF46934 | UBA-like | 43 | 83 | 8.06E-7 | IPR009060 |
| ProSiteProfiles | PS51140 | CUE domain profile. | 38 | 81 | 11.582493 | IPR003892 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 108 | - | - |
| Coils | Coil | Coil | 171 | 191 | - | - |
| Coils | Coil | Coil | 209 | 236 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32440.1 | Ubiquitin system component Cue protein. | 0 |
| RefSeq | XP_021760755.1 | uncharacterized protein LOC110725599 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803LH65 | CUE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology