Basic Information
Locus ID:
CQ.Regalona.r1.8BG0018440
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 70795031 | 70801043 | + | CQ.Regalona.r1.8BG0018440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 70,091.53 Da | 35.77 | 92.62 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 65 | 4.5E-12 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 298 | 563 | 7.1E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 117 | 176 | 1.0E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 193 | 4.54E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 277 | 567 | 1.13E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 266 | 373 | 1.6E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 207 | 1.9E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 374 | 585 | 1.8E-60 | - |
| SMART | SM00369 | LRR_typ_2 | 115 | 139 | 7.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 114 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 163 | 190 | 51.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 297 | 552 | 3.6E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 576 | 35.297558 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 416 | 428 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 303 | 325 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 599 | 640 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021731410.1 | probable LRR receptor-like serine/threonine-protein kinase At4g30520 isoform X1 [Chenopodium quinoa] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QWR0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_132580 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology