Basic Information
Locus ID:
CQ.Regalona.r1.8BG0017960
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 70014325 | 70028630 | - | CQ.Regalona.r1.8BG0017960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 196,593.67 Da | 47.13 | 80.66 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 366 | 638 | 1.02747E-132 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1479 | 1742 | 2.64615E-148 | IPR044769 |
| Pfam | PF01363 | FYVE zinc finger | 30 | 98 | 1.2E-17 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1518 | 1684 | 1.4E-32 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 387 | 627 | 5.5E-31 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1473 | 1742 | 2.75E-80 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 433 | 604 | 8.11E-40 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 29 | 99 | 4.51E-18 | IPR011011 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1458 | 1599 | 4.3E-37 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 431 | 604 | 3.1E-52 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1601 | 1743 | 5.4E-42 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 21 | 104 | 5.1E-21 | IPR013083 |
| SMART | SM00064 | fyve_4 | 25 | 100 | 3.4E-18 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1452 | 1743 | 2.8E-126 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1417 | 1742 | 56.846313 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 33 | 99 | 13.216435 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1264 | 1292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1264 | 1284 | - | - |
| Coils | Coil | Coil | 1081 | 1101 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_021750291.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M8V7 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology