Basic Information
Locus ID:
CQ.Regalona.r1.8BG0010480
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Casein Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 22340015 | 22348837 | - | CQ.Regalona.r1.8BG0010480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 37,745.34 Da | 55.78 | 85.30 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 274 | 328 | 4.2E-7 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13670.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_021858161.1 | casein kinase 1-like protein HD16 [Spinacia oleracea] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K3M4V2 | Casein kinase i isoform alpha (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g041884 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg23892 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8BG0010480 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0301251, Pt_Chr0306813 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5AG062280 |