Basic Information
Locus ID:
CQ.Regalona.r1.8BG0008430
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 12756117 | 12774942 | - | CQ.Regalona.r1.8BG0008430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 67,758.92 Da | 42.44 | 87.55 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 28 | 126 | 1.9E-17 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 369 | 542 | 8.2E-28 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 151 | 239 | 7.9E-11 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 325 | 584 | 2.97E-55 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 23 | 128 | 2.3E-22 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 137 | 241 | 5.6E-18 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 361 | 556 | 6.2E-59 | - |
| SMART | SM00220 | serkin_6 | 340 | 524 | 1.9E-9 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 134 | 241 | 14.687482 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 23 | 128 | 16.344017 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 241 | 552 | 22.280144 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 398 | 410 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 571 | 607 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021723587.1 | putative receptor-like protein kinase At4g00960 isoform X1 [Chenopodium quinoa] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | A0A803MDW9 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000031152 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0007900, CQ.Regalona.r1.8BG0008430 |