Basic Information
Locus ID:
CQ.Regalona.r1.8BG0008110
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 11918785 | 11925206 | - | CQ.Regalona.r1.8BG0008110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 75,715.84 Da | 46.51 | 93.19 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 113 | 172 | 8.0E-12 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 47 | 85 | 2.1E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 401 | 533 | 1.5E-10 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 189 | 1.85E-30 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 649 | 9.5E-31 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 362 | 469 | 8.9E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 471 | 657 | 1.6E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 221 | 8.6E-42 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 111 | 134 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 159 | 183 | 62.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 135 | 158 | 12.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 387 | 654 | 15.919845 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 316 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021723913.1 | protein MALE DISCOVERER 1-like [Chenopodium quinoa] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803ME01 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology