Basic Information
Locus ID:
CQ.Regalona.r1.8BG0006810
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 8596261 | 8601687 | + | CQ.Regalona.r1.8BG0006810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 62,662.01 Da | 25.95 | 92.13 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 379 | 561 | 6.48667E-86 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 20 | 179 | 7.70117E-89 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 17 | 183 | 4.3E-34 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 214 | 330 | 7.7E-23 | IPR012000 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 425 | 548 | 9.8E-15 | IPR011766 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 379 | 573 | 3.93E-42 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 17 | 196 | 2.75E-43 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 203 | 355 | 3.05E-34 | IPR029035 |
| Gene3D | G3DSA:3.40.50.1220 | - | 203 | 366 | 6.3E-44 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 372 | 563 | 5.3E-55 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 15 | 189 | 4.4E-59 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 12 | 573 | 1.9E-205 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_021749331.1 | pyruvate decarboxylase 1 [Chenopodium quinoa] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6P4M4E5 | pyruvate decarboxylase OS=Gossypium arboreum OX=29729 GN=LOC108453699 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology