Basic Information
Locus ID:
CQ.Regalona.r1.8BG0006030
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 7446006 | 7450529 | + | CQ.Regalona.r1.8BG0006030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 110,127.29 Da | 30.00 | 93.42 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 113 | 133 | 0.28 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 136 | 151 | 0.24 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 60 | 6.0E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 496 | 556 | 1.4E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 683 | 937 | 1.1E-41 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 72 | 413 | 3.41E-55 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 346 | 584 | 1.49E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 667 | 961 | 3.37E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 199 | 305 | 2.1E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 769 | 985 | 7.4E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 198 | 7.4E-50 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 306 | 613 | 4.6E-82 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 665 | 768 | 3.1E-23 | - |
| SMART | SM00369 | LRR_typ_2 | 543 | 566 | 6.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 87 | 111 | 120.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 681 | 948 | 1.2E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 135 | 158 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 495 | 519 | 19.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 545 | 568 | 7.288416 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 681 | 965 | 36.117329 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 687 | 710 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 813 | 825 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 138 | 151 | 3.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 543 | 556 | 3.2E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_021726527.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LLM4 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology