HalophFGD

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Basic Information
Locus ID: CQ.Regalona.r1.8BG0003420
Species & Taxonomic ID: Chenopodium quinoa & 63459
Genome Assembly: GCA_040571445.1
Description: F-box kelch-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr8B 3849785 3850945 - CQ.Regalona.r1.8BG0003420
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.77 44,754.45 Da 35.91 94.90 -0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 24 56 1.0E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 24 68 6.93E-9 IPR036047
Gene3D G3DSA:1.20.1280.50 - 18 67 4.7E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021726191.1 F-box/kelch-repeat protein At3g06240-like [Chenopodium quinoa] 0
TrEMBL A0A803LL06 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 1 Ah017788
Amaranthaceae Suaeda aralocaspica 1 GOSA_00023826
Amaranthaceae Suaeda glauca 1 Sgl50424
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.2AG0007000, CQ.Regalona.r1.8BG0003420
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.