Basic Information
Locus ID:
CQ.Regalona.r1.8BG0002710
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 3027536 | 3031853 | + | CQ.Regalona.r1.8BG0002710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 12,133.57 Da | 47.69 | 106.11 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 100 | 1.3E-8 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 101 | 4.01E-17 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 112 | 1.5E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 108 | 8.810442 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.2 | - | 0 |
| RefSeq | XP_021762416.1 | cysteine-rich receptor-like protein kinase 15 [Chenopodium quinoa] | 0 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 0 | |
| TrEMBL | A0A803N952 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg18911 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8BG0002710 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30071340 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21013 |