Basic Information
Locus ID:
CQ.Regalona.r1.8BG0001510
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 1662594 | 1666749 | - | CQ.Regalona.r1.8BG0001510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 56,299.21 Da | 37.22 | 83.85 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 376 | 447 | 1.1E-20 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 39 | 358 | 2.2E-74 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 39 | 358 | 7.73E-80 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 369 | 479 | 3.4E-12 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 38 | 365 | 4.3E-107 | - |
| SMART | SM00768 | X8_cls | 375 | 460 | 4.7E-49 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 273 | 286 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021766864.1 | glucan endo-1,3-beta-glucosidase 1-like [Chenopodium quinoa] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A803M1V2 | X8 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology