Basic Information
Locus ID:
CQ.Regalona.r1.8BG0000020
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 18473 | 25744 | - | CQ.Regalona.r1.8BG0000020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.49 | 105,725.69 Da | 37.86 | 93.33 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 635 | 902 | 2.74611E-99 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 631 | 898 | 9.9E-50 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 64 | 8.9E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 615 | 907 | 7.42E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 399 | 4.08E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 189 | 5.3E-38 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 601 | 704 | 7.0E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 392 | 9.2E-35 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 705 | 919 | 2.4E-58 | - |
| SMART | SM00220 | serkin_6 | 629 | 902 | 1.1E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 629 | 903 | 39.142006 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 635 | 657 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 749 | 761 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021766713.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Chenopodium quinoa] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M1G4 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology