Basic Information
Locus ID:
CQ.Regalona.r1.8AG0022680
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Translocase of chloroplast 90
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 62476680 | 62482375 | - | CQ.Regalona.r1.8AG0022680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.96 | 87,323.18 Da | 45.56 | 88.29 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 506 | 769 | 5.4E-117 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 166 | 325 | 9.1E-23 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 162 | 293 | 9.2E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 136 | 385 | 3.9E-49 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 91 | 770 | 3.4E-209 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 163 | 393 | 27.0581 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 87 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_021741808.1 | translocase of chloroplast 90, chloroplastic-like [Chenopodium quinoa] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LH39 | AIG1-type G domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology