Basic Information
Locus ID:
CQ.Regalona.r1.8AG0022020
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 61562945 | 61567108 | + | CQ.Regalona.r1.8AG0022020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.99 | 66,634.57 Da | 42.36 | 105.15 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 197 | 220 | 0.0034 | IPR001611 |
| Pfam | PF00646 | F-box domain | 57 | 96 | 5.2E-7 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 222 | 246 | 0.09 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 157 | 393 | 4.32E-36 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 49 | 93 | 1.16E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 284 | 626 | 2.16E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 427 | 627 | 2.0E-31 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 50 | 95 | 1.2E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 237 | 426 | 4.5E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 236 | 2.4E-24 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 594 | 619 | 560.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 329 | 354 | 0.17 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 542 | 566 | 10.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 171 | 196 | 0.021 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 249 | 274 | 0.011 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 489 | 514 | 0.033 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 223 | 248 | 5.8E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 197 | 222 | 2.0E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 355 | 380 | 52.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 436 | 461 | 16.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 516 | 541 | 38.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 408 | 433 | 150.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 462 | 487 | 0.028 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 381 | 406 | 330.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 568 | 593 | 4.2 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_021741735.1 | EIN3-binding F-box protein 2-like [Chenopodium quinoa] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LHA0 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology