Basic Information
Locus ID:
CQ.Regalona.r1.8AG0012430
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 42151914 | 42172052 | - | CQ.Regalona.r1.8AG0012430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 103,498.22 Da | 44.17 | 86.94 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 731 | 904 | 2.22295E-58 | - |
| Pfam | PF06337 | DUSP domain | 42 | 144 | 6.2E-23 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 316 | 903 | 1.5E-85 | IPR001394 |
| SUPERFAMILY | SSF143791 | DUSP-like | 18 | 144 | 1.19E-26 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 314 | 905 | 5.89E-107 | IPR038765 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 163 | 237 | 1.17E-5 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 157 | 242 | 1.0E-11 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 698 | 913 | 7.5E-56 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 299 | 542 | 4.9E-65 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 12 | 156 | 1.0E-35 | - |
| SMART | SM00695 | dusp | 38 | 146 | 6.0E-28 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 19 | 143 | 18.5982 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 316 | 906 | 56.697533 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 848 | 865 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 317 | 332 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_021724802.1 | ubiquitin carboxyl-terminal hydrolase 5-like [Chenopodium quinoa] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803MRX8 | Ubiquitin carboxyl-terminal hydrolase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology