Basic Information
Locus ID:
CQ.Regalona.r1.8AG0007900
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 12696165 | 12701514 | + | CQ.Regalona.r1.8AG0007900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 65,723.26 Da | 39.53 | 88.93 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 33 | 124 | 9.1E-18 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 157 | 238 | 2.1E-8 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 361 | 528 | 5.6E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 320 | 561 | 5.64E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 346 | 539 | 1.1E-57 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 22 | 127 | 9.4E-25 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 136 | 240 | 5.7E-16 | IPR038408 |
| SMART | SM00220 | serkin_6 | 335 | 578 | 4.0E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 248 | 531 | 22.364948 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 133 | 240 | 14.144357 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 22 | 127 | 19.638981 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 381 | 393 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 559 | 590 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021723571.1 | putative receptor-like protein kinase At4g00960 isoform X1 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803NE47 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000031152 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0007900, CQ.Regalona.r1.8BG0008430 |